Articles
Virulence and diversity of Puccinia striiformis in South Russia
Galina V. VOLKOVA- Olga A. KUDINOVA
- Irina P. MATVEEVA
Published 2021-05-14
Keywords
- Yellow rust,
- virulence,
- effective resistance genes,
- pathogen population
How to Cite
[1]
G. V. VOLKOVA, O. A. KUDINOVA, and I. P. MATVEEVA, “Virulence and diversity of Puccinia striiformis in South Russia”, Phytopathol. Mediterr., vol. 60, no. 1, pp. 119–127, May 2021.
Abstract
Puccinia striiformis causes wheat yield losses in all countries where wheat is cultivated. Virulence and diversity of the P. striiformis were assessed in 2013–2018 in South Russia, and this showed that the North Caucasian population of the pathogen was diverse. One hundred and eighty two virulence phenotypes were identified in 186 P. striiformis isolates. Among isolates collected in 2014, 2015, and 2018, all phenotypes were unique. In the 2013 and 2017 populations, phenotypes with few (one to eight) virulence alleles prevailed. In the 2014, 2015, and 2018 populations, most of the phenotypes contained greater numbers (nine to 19) of virulence alleles. Over the 5 years of research, the pathogen population lacked isolates virulent to the host Yr resistance genes 3, 5, 26, and Sp. Single (from 1 to 5%) occurrences of isolates virulent to host lines with Yr genes 3a, 17, 24, 3b + 4a + H46, and 3c + Min were identified. Differences in frequencies of virulence alleles between years in the P. striiformis populations (Ney indices, N) were generally non-significant (N = 0.11 to 0.23), with the exception of the populations in 2013 and 2017 (N = 0.37). The minimum N values was found for the populations of 2015 and 2018 (N = 0.10). Over the five years of this study, the dynamics of the virulence of the population and jumps in the frequency of isolates with respect to many Yr genes were identified. This feature of the P. striiformis populations in South Russia, combined with high phenotypic diversity, indicates the ability for rapid race formation and morphogenesis in response to changes in biotic and abiotic factors.
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References
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Aktar-Uz-Zaman M., Tuhina-Khatun M., Hanafi M. M., Sahebi M., 2017. Genetic analysis of rust resistance genes in global wheat cultivars: an overview. Biotechnology & Biotechnological Equipment 31(3):431-445.
Ali S., Rodriguez-Algaba J., Thach T., Sorensen C.K., Hansen … Hovmoller M.S., 2017. Yellow rust epidemics worldwide were caused by pathogen races from divergent genetic lineages. Frontiers in Plant Science 8:1057.
Anpilogova L.K., Volkova G.V. 2000. Development Methods of Artificial Infectious Backgrounds and Wheat Varieties Assessment for Resistance to Harmful Diseases (spike fusarium, rust, powdery mildew). Recommendations. Krasnodar: RAAS, ARRIBPP, 28 pp. (in Russ.)
Ashmawy M.A., Shahin A.A., Samar M. E., Hend A. N., 2019. Virulence dynamics and diversity of Puccinia striiformis populations in Egypt during 2017/18 and 2018/19 growing seasons Journal of Plant Protection and Pathology 10 (12): 655-666.
Berdysh Yu.I. 2002. Phytosanitary Monitoring and Scientific Substantiation of Winter Wheat Protection Against Pests on Black Earth Soil of Western Ciscaucasia: PhD Thesis, Krasnodar, Russia, 173 pp. (in Russ.)
Brar G.S., McCallum B.D., Gaudet D.A., Puchalski B.J., Fernandez M.R., Kutcher H.R., 2016. Stripe rust disease dynamics in southern Alberta, Saskatchewan, and Manitoba, 2009-2014. Canadian Journal of Plant Pathology 38: 114–115.
Brar G.S., Dhariwal R., Randhawa H.S., 2018. Resistance evaluation of differentials and commercial wheat cultivars to stripe rust (Puccinia striiformis) infection in hot spot regions of Canada. European Journal of Plant Pathology 152: 269.
Bux H., Ashraf M., Chen X., Mumtaz A.S., 2011. Effective genes for resistance to stripe rust and virulence of Puccinia striiformis f. sp. tritici in Pakistan. African Journal of Biotechnology 10(28): 5489-5495.
Bux H., Rasheed A., Mangrio S.M., Abro S.A., Shah S.J.A., … Chen X., 2012. Comparative virulence and molecular diversity of stripe rust (Puccinia striiformis F. SP. tritici) collections from Pakistan and United States. Internationaol Journal of Agricultural Biology 14: 851-860.
Chen X. M., 2005. Epidemiology and control of stripe rust (Puccinia striiformis f. sp. tritici) on wheat. Canadian Journal of Plant Pathology 27:314-337.
Chuprina V.P., Sokolov M.S., Anpilogova L.K., Kobileva E.A., Levashova G.I., Pikushova V.V., 1999. Protection of wheat crops against stripe rust, taking into account the epiphytotic and biotrophic characteristics of its pathogen Puccinia striiformis West. Agrochemistry 7: 81-94. (in Russ.)
Dobryanskaya M.V., Anpilogova L.K., Vysotskaya N.I., 1999. Model of sporulation of the stripe rust pathogen. Protection and quarantine of plants 8: 25-26. (in Russ.)
Gerechter-Amitai Z.K., Sifhou C.H., Grama A., Kleitman F., 1989. Yr15: a new gene for resistance to Puccinia striiformis in Triticcum dicoccoides sel. G-25. Euphytica 43:187–190.
Gebreslasie Z. S., Huang S., Zhan G., Badebo A., Zeng Q.,... Kang Z., 2020. Stripe rust resistance genes in a set of Ethiopian bread wheat cultivars and breeding lines. Euphytica 216(2): 17.
Green G.J., 1965. Stem rust of wheat, rye and barley in Canada in 1964. Plant Disease survey 45(1): 23-39.
Han D.J., Wang Q.L., Chen X.M., Zeng Q.D., Wu J.H., ... Kang, Z. S., 2015. Emerging Yr26-virulent races of Puccinia striiformis f. tritici are threatening wheat production in the Sichuan Basin, China. Plant Disease 99(6): 754-760.
Hovmøller M.S., Justesen A.F., 2007. Rates of evolution of avirulence phenotypes and DNA markers in a northwest European population of Puccinia striiformis f. sp. tritici. Molecular Ecology 16: 4637–4647.
Hovmøller M.S., Rodriguez-Algaba J., Thach, T., Sørensen, C.K., 2017. Race typing of Puccinia striiformis on wheat. In: Wheat rust diseases. Humana Press, New York, NY., 29-40.
Hovmøller M.S., Rodriguez-Algaba J., Thach T., Justesen, A.F., Hansen J.G., 2018. Report for Puccinia striiformis race analyses and molecular genotyping 2017, Global Rust Reference Center (GRRC), Aarhus University, Flakkebjerg, DK-4200 Slagelse, Denmark.
Available at: https://agro.au.dk/fileadmin/Summary_of_Puccinia_striiformis_race_analysis_2017.pdf
Hovmøller M.S., Rodriguez-Algaba J., Thach T., Justesen A.F., Hansen J.G., 2020. GRRC annual report 2019: Stem and yellow rust genotyping and race analyses. Aarhus University, Department of Agroecology, DK-4200 Slagese, Denmark. Available at: https://agro.au.dk/fileadmin/www.grcc.au.dk/International_Services/Pathotype_YR_results/GRRC_annual_report_2019.pdf
Huerta-Espino J., Singh R.P., 2017. First detection of virulence in Puccinia striiformis f. sp. tritici to wheat resistance genes Yr10 and Yr24 (= Yr26) in Mexico. Plant Disease 101(9): 1676-1676.
Kolmer J.A., Long D.L., Kosman, E., Hughes, M.E., 2003. Physiologic specialization of Puccinia triticina on wheat in the United States in 2001. Plant Disease 87:859-866.
Kosman E., 1996. Difference and diversity of plant pathogen populations: a new approach for measuring. Phytopathology 86: 1152–1155.
Kosman E., Leonard K.J., 2007. Conceptual analysis of methods applied to assessment of diversity within and distance between populations with asexual or mixed mode of reproduction. New Phytologist 174: 683–696.
Kumar K., Holtz M.D., Xi K., Turkington T.K., 2012. Virulence of Puccinia striiformis on wheat and barley in central Alberta. Canadian Journal of Plant Pathology 34(4): 551-561.
Line R.F., 2002. Stripe rust of wheat and barley in North America: A retrospective historical review. Annual Review of Phytopathology 40:75-118.
Liu T., Wan A., Liu D., Chen X., 2017. Changes of races and virulence genes in Puccinia striiformis f. sp. tritici, the wheat stripe rust pathogen, in the United States from 1968 to 2009. Plant Disease 101(8): 1522-1532.
MacKenzie D. Crop disease to add to east Africa's woes [Electronic resource]. 2011. 1 p. Available at: http://www.newscientist.com/article/mg21128214.100-crop-disease-to-add-to-east-africas-woes.html
McIntosh R.A. Lagudah E.S., 2000. Cytogenetical studies in wheat. XVIII. Gene Yr24 for resistance to stripe rust. Plant Breeding 119: 81–83.
Morozova A.A., 1974. Species composition of winter wheat rust and their distribution in the Krasnodar Territory. Proceedings of the Kuban Agricultural Institute 79 (107): 49-55. (in Russ.)
Rahmatov M., 2016. Genetic Characterisation of Novel Resistance Alleles to Stem Rust and Stripe Rust in Wheat-Alien Introgression Lines: PhD Thesis, Alnarp: Swedish University of Agricultural Sciences, Sweden, 76 pp.
Roelfs A.P., Singh R.P., Saari E.E., 1992. Rust Diseases of Wheat: Concepts and Methods Management. CIMMIT, Mexico, 81 pp.
Sanin S.S., Nazarova L. N., 2010. Phytosanitary situation on wheat crops in the Russian Federation (1991-2008). Protection and quarantine of plants 2: 20 p. (in Russ.)
Shahin A., Ashmawy M., El-Orabey W., Esmail S., 2020. Yield Losses in Wheat Caused by Stripe Rust (Puccinia striiformis) in Egypt. American Journal of Life Sciences 8 (5): 127-134.
Shumilov Yu.V., 2013. Agrobiological Substantiation of Methods of Reducing the Infectious Potential of the Wheat Stripe Rust Pathogen in the North Caucasus: PhD Thesis, N.I. Vavilov Saratov State Agricultural University, Russia, 24 pp. (in Russ.)
Shumilov Yu.V., Volkova G.V. 2013. Wheat stripe rust requires special attention. Protection and quarantine of plants 8: 13-14. (in Russ.)
Shumilov Yu.V., Volkova G.V., Nadykta V.D., 2015. Structure of the wheat stripe rust pathogen population by virulence in the North Caucasus. Mycology and phytopathology 49 (3): 194-200. (in Russ.)
Singh R.P., William H.M., Huerta-Espino J., Rosewarne G., 2004. Wheat Rust in Asia: Meeting the challenges with old and new technologies. In: New directions for a diverse planet. Proceed. 4th International Crop Science Congress, September 26 to October1, Brisbane, Australia. Available at: http://www.cropscience.org.au./icsc2004/symposia/3/7/141_singhrp.html
Smirnova L.A., Alekseeva T.P. 1988. An improved method of cultivation of seedlings of grain crops for immunological studies. Selection and seed production 4 25-27. (in Russ.)
Volkova G.V., Matveeva I.P., Kudinova O.A. 2020. Virulence of the wheat yellow rust pathogen population in the North Caucasus region of Russia. Mycology and phytopathology 54(1): 33-41. (in Russ.)
Volkova G.V., Shulyakovskaya L.N., Kudinova O.A., Matveeva I.P., 2018. Wheat yellow rust in the Kuban. Plant Protection and Quarantine 4: 29. (in Russ.)
Matveeva I.P., Volkova G.V. 2019. Wheat yellow rust: Distribution, harmfulness, control measures (review). Bulletin of the Ulyanovsk State Agricultural Academy 2 (46):102-116. (in Russ.)
Waqar A., Khattak S.H., Begum S., Rehman T., Rabia A. … Ali. G.M., 2018. Stripe rust: A review of the disease, Yr genes and its molecular markers. Sarhad Journal of Agriculture 34(1): 188-201.
Wan A. M., Chen X. M., 2014. Virulence characterization of Puccinia striiformis f. sp. tritici using a new set of Yr single-gene line differentials in the United States in 2010. Plant Disease 98:1534-1542.
Wang M., 2017. Stripe rust resistance. In: Stripe Rust (Chen X., Kang Z. ed.), Springer, Dordrecht, 353-558.
Wellings C.R., McIntosh R.A., 1990. Puccinia striiformis f.sp. tritici in Australasia: pathogenic changes during the first 10 years. Plant Pathology 39 (2): 316-325.
Wellings C.R., Kandel K.R., 2004. Pathogen dynamics associated with historic stripe (yellow) rust epidemics in Australia in 2002 and 2003. In: Proceedings of the 11th International Cereal Rusts and Powdery Mildews Conference. Abstr. A2.74.1 p. Available at: http://www.crpmb.org/icrpmc11/abstracts.html
Wellings C.R., 2011. Global status of stripe rust: a review of historical and current threats. Euphytica 179:129–141.
Aktar-Uz-Zaman M., Tuhina-Khatun M., Hanafi M. M., Sahebi M., 2017. Genetic analysis of rust resistance genes in global wheat cultivars: an overview. Biotechnology & Biotechnological Equipment 31(3):431-445.
Ali S., Rodriguez-Algaba J., Thach T., Sorensen C.K., Hansen … Hovmoller M.S., 2017. Yellow rust epidemics worldwide were caused by pathogen races from divergent genetic lineages. Frontiers in Plant Science 8:1057.
Anpilogova L.K., Volkova G.V. 2000. Development Methods of Artificial Infectious Backgrounds and Wheat Varieties Assessment for Resistance to Harmful Diseases (spike fusarium, rust, powdery mildew). Recommendations. Krasnodar: RAAS, ARRIBPP, 28 pp. (in Russ.)
Ashmawy M.A., Shahin A.A., Samar M. E., Hend A. N., 2019. Virulence dynamics and diversity of Puccinia striiformis populations in Egypt during 2017/18 and 2018/19 growing seasons Journal of Plant Protection and Pathology 10 (12): 655-666.
Berdysh Yu.I. 2002. Phytosanitary Monitoring and Scientific Substantiation of Winter Wheat Protection Against Pests on Black Earth Soil of Western Ciscaucasia: PhD Thesis, Krasnodar, Russia, 173 pp. (in Russ.)
Brar G.S., McCallum B.D., Gaudet D.A., Puchalski B.J., Fernandez M.R., Kutcher H.R., 2016. Stripe rust disease dynamics in southern Alberta, Saskatchewan, and Manitoba, 2009-2014. Canadian Journal of Plant Pathology 38: 114–115.
Brar G.S., Dhariwal R., Randhawa H.S., 2018. Resistance evaluation of differentials and commercial wheat cultivars to stripe rust (Puccinia striiformis) infection in hot spot regions of Canada. European Journal of Plant Pathology 152: 269.
Bux H., Ashraf M., Chen X., Mumtaz A.S., 2011. Effective genes for resistance to stripe rust and virulence of Puccinia striiformis f. sp. tritici in Pakistan. African Journal of Biotechnology 10(28): 5489-5495.
Bux H., Rasheed A., Mangrio S.M., Abro S.A., Shah S.J.A., … Chen X., 2012. Comparative virulence and molecular diversity of stripe rust (Puccinia striiformis F. SP. tritici) collections from Pakistan and United States. Internationaol Journal of Agricultural Biology 14: 851-860.
Chen X. M., 2005. Epidemiology and control of stripe rust (Puccinia striiformis f. sp. tritici) on wheat. Canadian Journal of Plant Pathology 27:314-337.
Chuprina V.P., Sokolov M.S., Anpilogova L.K., Kobileva E.A., Levashova G.I., Pikushova V.V., 1999. Protection of wheat crops against stripe rust, taking into account the epiphytotic and biotrophic characteristics of its pathogen Puccinia striiformis West. Agrochemistry 7: 81-94. (in Russ.)
Dobryanskaya M.V., Anpilogova L.K., Vysotskaya N.I., 1999. Model of sporulation of the stripe rust pathogen. Protection and quarantine of plants 8: 25-26. (in Russ.)
Gerechter-Amitai Z.K., Sifhou C.H., Grama A., Kleitman F., 1989. Yr15: a new gene for resistance to Puccinia striiformis in Triticcum dicoccoides sel. G-25. Euphytica 43:187–190.
Gebreslasie Z. S., Huang S., Zhan G., Badebo A., Zeng Q.,... Kang Z., 2020. Stripe rust resistance genes in a set of Ethiopian bread wheat cultivars and breeding lines. Euphytica 216(2): 17.
Green G.J., 1965. Stem rust of wheat, rye and barley in Canada in 1964. Plant Disease survey 45(1): 23-39.
Han D.J., Wang Q.L., Chen X.M., Zeng Q.D., Wu J.H., ... Kang, Z. S., 2015. Emerging Yr26-virulent races of Puccinia striiformis f. tritici are threatening wheat production in the Sichuan Basin, China. Plant Disease 99(6): 754-760.
Hovmøller M.S., Justesen A.F., 2007. Rates of evolution of avirulence phenotypes and DNA markers in a northwest European population of Puccinia striiformis f. sp. tritici. Molecular Ecology 16: 4637–4647.
Hovmøller M.S., Rodriguez-Algaba J., Thach, T., Sørensen, C.K., 2017. Race typing of Puccinia striiformis on wheat. In: Wheat rust diseases. Humana Press, New York, NY., 29-40.
Hovmøller M.S., Rodriguez-Algaba J., Thach T., Justesen, A.F., Hansen J.G., 2018. Report for Puccinia striiformis race analyses and molecular genotyping 2017, Global Rust Reference Center (GRRC), Aarhus University, Flakkebjerg, DK-4200 Slagelse, Denmark.
Available at: https://agro.au.dk/fileadmin/Summary_of_Puccinia_striiformis_race_analysis_2017.pdf
Hovmøller M.S., Rodriguez-Algaba J., Thach T., Justesen A.F., Hansen J.G., 2020. GRRC annual report 2019: Stem and yellow rust genotyping and race analyses. Aarhus University, Department of Agroecology, DK-4200 Slagese, Denmark. Available at: https://agro.au.dk/fileadmin/www.grcc.au.dk/International_Services/Pathotype_YR_results/GRRC_annual_report_2019.pdf
Huerta-Espino J., Singh R.P., 2017. First detection of virulence in Puccinia striiformis f. sp. tritici to wheat resistance genes Yr10 and Yr24 (= Yr26) in Mexico. Plant Disease 101(9): 1676-1676.
Kolmer J.A., Long D.L., Kosman, E., Hughes, M.E., 2003. Physiologic specialization of Puccinia triticina on wheat in the United States in 2001. Plant Disease 87:859-866.
Kosman E., 1996. Difference and diversity of plant pathogen populations: a new approach for measuring. Phytopathology 86: 1152–1155.
Kosman E., Leonard K.J., 2007. Conceptual analysis of methods applied to assessment of diversity within and distance between populations with asexual or mixed mode of reproduction. New Phytologist 174: 683–696.
Kumar K., Holtz M.D., Xi K., Turkington T.K., 2012. Virulence of Puccinia striiformis on wheat and barley in central Alberta. Canadian Journal of Plant Pathology 34(4): 551-561.
Line R.F., 2002. Stripe rust of wheat and barley in North America: A retrospective historical review. Annual Review of Phytopathology 40:75-118.
Liu T., Wan A., Liu D., Chen X., 2017. Changes of races and virulence genes in Puccinia striiformis f. sp. tritici, the wheat stripe rust pathogen, in the United States from 1968 to 2009. Plant Disease 101(8): 1522-1532.
MacKenzie D. Crop disease to add to east Africa's woes [Electronic resource]. 2011. 1 p. Available at: http://www.newscientist.com/article/mg21128214.100-crop-disease-to-add-to-east-africas-woes.html
McIntosh R.A. Lagudah E.S., 2000. Cytogenetical studies in wheat. XVIII. Gene Yr24 for resistance to stripe rust. Plant Breeding 119: 81–83.
Morozova A.A., 1974. Species composition of winter wheat rust and their distribution in the Krasnodar Territory. Proceedings of the Kuban Agricultural Institute 79 (107): 49-55. (in Russ.)
Rahmatov M., 2016. Genetic Characterisation of Novel Resistance Alleles to Stem Rust and Stripe Rust in Wheat-Alien Introgression Lines: PhD Thesis, Alnarp: Swedish University of Agricultural Sciences, Sweden, 76 pp.
Roelfs A.P., Singh R.P., Saari E.E., 1992. Rust Diseases of Wheat: Concepts and Methods Management. CIMMIT, Mexico, 81 pp.
Sanin S.S., Nazarova L. N., 2010. Phytosanitary situation on wheat crops in the Russian Federation (1991-2008). Protection and quarantine of plants 2: 20 p. (in Russ.)
Shahin A., Ashmawy M., El-Orabey W., Esmail S., 2020. Yield Losses in Wheat Caused by Stripe Rust (Puccinia striiformis) in Egypt. American Journal of Life Sciences 8 (5): 127-134.
Shumilov Yu.V., 2013. Agrobiological Substantiation of Methods of Reducing the Infectious Potential of the Wheat Stripe Rust Pathogen in the North Caucasus: PhD Thesis, N.I. Vavilov Saratov State Agricultural University, Russia, 24 pp. (in Russ.)
Shumilov Yu.V., Volkova G.V. 2013. Wheat stripe rust requires special attention. Protection and quarantine of plants 8: 13-14. (in Russ.)
Shumilov Yu.V., Volkova G.V., Nadykta V.D., 2015. Structure of the wheat stripe rust pathogen population by virulence in the North Caucasus. Mycology and phytopathology 49 (3): 194-200. (in Russ.)
Singh R.P., William H.M., Huerta-Espino J., Rosewarne G., 2004. Wheat Rust in Asia: Meeting the challenges with old and new technologies. In: New directions for a diverse planet. Proceed. 4th International Crop Science Congress, September 26 to October1, Brisbane, Australia. Available at: http://www.cropscience.org.au./icsc2004/symposia/3/7/141_singhrp.html
Smirnova L.A., Alekseeva T.P. 1988. An improved method of cultivation of seedlings of grain crops for immunological studies. Selection and seed production 4 25-27. (in Russ.)
Volkova G.V., Matveeva I.P., Kudinova O.A. 2020. Virulence of the wheat yellow rust pathogen population in the North Caucasus region of Russia. Mycology and phytopathology 54(1): 33-41. (in Russ.)
Volkova G.V., Shulyakovskaya L.N., Kudinova O.A., Matveeva I.P., 2018. Wheat yellow rust in the Kuban. Plant Protection and Quarantine 4: 29. (in Russ.)
Matveeva I.P., Volkova G.V. 2019. Wheat yellow rust: Distribution, harmfulness, control measures (review). Bulletin of the Ulyanovsk State Agricultural Academy 2 (46):102-116. (in Russ.)
Waqar A., Khattak S.H., Begum S., Rehman T., Rabia A. … Ali. G.M., 2018. Stripe rust: A review of the disease, Yr genes and its molecular markers. Sarhad Journal of Agriculture 34(1): 188-201.
Wan A. M., Chen X. M., 2014. Virulence characterization of Puccinia striiformis f. sp. tritici using a new set of Yr single-gene line differentials in the United States in 2010. Plant Disease 98:1534-1542.
Wang M., 2017. Stripe rust resistance. In: Stripe Rust (Chen X., Kang Z. ed.), Springer, Dordrecht, 353-558.
Wellings C.R., McIntosh R.A., 1990. Puccinia striiformis f.sp. tritici in Australasia: pathogenic changes during the first 10 years. Plant Pathology 39 (2): 316-325.
Wellings C.R., Kandel K.R., 2004. Pathogen dynamics associated with historic stripe (yellow) rust epidemics in Australia in 2002 and 2003. In: Proceedings of the 11th International Cereal Rusts and Powdery Mildews Conference. Abstr. A2.74.1 p. Available at: http://www.crpmb.org/icrpmc11/abstracts.html
Wellings C.R., 2011. Global status of stripe rust: a review of historical and current threats. Euphytica 179:129–141.